Andre Machado @AndreMMMachado
Joined March 2018-
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Following178
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"Em Portugal as propostas de trabalho que me foram feitas rondavam os mil e poucos euros brutos, no estrangeiro era de um salário quatro vezes superior" Adriana Filipa Lopes Cardoso, Finalista do Mestrado Integrado em Ciências Farmacêuticas #ÉouNãoÉoEssencial
My dear Biologist colleague, solely stating that “Statistical analysis were done in R” is NOT a sufficient description of the bioinformatics Methods of your paper, as just saying “experiments were performed in a lab” would not be of the experimental Material and Methods
Miniprot, a new mapper for aligning proteins to genomes with splicing and frameshift. Can be used for annotating new genomes. ~20k mouse proteins to the human genome in 5 mins over 16 threads. Still WIP. Feedback welcomed. github.com/lh3/miniprot
Verifying myself: I am andremachado2 on Keybase.io. 7SvOzXYaM2Yr_knwZJ1-ik51Pn_-vxr4-Ixe / keybase.io/andremachado2/…
Verifying myself: I am andremmachado on Keybase.io. aI1Pr0yyX_pc_9hrXx621n1eCglsxBM5E-Fc / keybase.io/andremmachado/…
A little about my thesis "Shedding lihgt on the Holocephali taxonomy, the mitogenome of Chimaera opalescens" #ISMS2022
This new treatment has truly remarkable results. Initially I thought the photos might be fake, but I read the original NEJM article, and they are very real forbes.com/sites/stevensa…
Not me spending the night having stress dreams about work stuff, waking up with my heart racing at dawn with a sense of panic about a deadline and finally just giving in to working on a Sunday morning because there’s no other way to get this nagging feeling under control…🌞
Do you struggle with writing down your scientific work? Here are some tips from me that have helped me write whole chapters in only a weekend and my master thesis in a week! 😅 #WritingCommunity #AcademicTwitter #phdlife #phdvoice @AcademicChatter @PhDVoice @PhDinGermany
The language context of Ukraine can be a tricky topic for any outsider. In this long and personal thread, I’ll illustrate the relationship between 🇺🇦 and 🇷🇺 languages in Ukraine using my family’s history. I’m a bilingual Ukrainian raised in a Russian-speaking family in Kyiv.
Florida released 4 examples of why it banned 40+ math textbooks. Read my #BANNED blog piece (taken down by @forbes because they say they can't allow satire) explaining the real reasons: genome.fieldofscience.com/2022/04/the-ma…
I've been censored! No kidding, @forbes took down my blog post today after it started to go viral. The link was forbes.com/sites/stevensa… but it no longer works. The satire was too much for Forbes readers, apparently. If you want to see the same content... 1/2
Finally new paper out!!! The complete mitogenome of opal chimera, Chimaera opalescens @perezro_montse @IEOVigo @campusdomar @AndreMaGoSaP @Ifilipecastro @AndreMMMachado @CiimarUp tandfonline.com/doi/full/10.10…
#paper by @CiimarUp #researchers @lfilipecastro @AndreMMMachado reveals the genome of the mackerel: a new essencial tool to study the population dynamics and regulate its #sustainable exploitation👌🌊🐟 #CIIMARpapers #CIIMARresearch #CIIMARnews @Publico publico.pt/2022/02/16/cie…
Losing our tail had big consequences for our ancestors, but how did it happen? In our paper, led by @BoXia7, and with @JefBoeke, we propose that tail-loss involved the insertion of a single transposable element, with implications for our health today. biorxiv.org/content/10.110…
A mentor’s love for their trainees can be measured in tracked changes
please RT! Biodiversity Genomics 2021 registration is now live. Registration is FREE. Join us virtually from Sep 27th to Oct 1st this year. Find out more and register here: tinyurl.com/biogenomics21
Exciting news from Norway!
The Norwegian hub of the Earth Biogenome Project (EBP-Nor) is officially funded! This 30M NOK effort led by @kjetillj will start to sequence the genomes of ~45,000 species in collaboration with researchers in Europe through @erga_biodiv and around the world with @EBPgenome.
holy shit 1 MIN drosophila assembly and 10 MIN human assembly on @PacBio HiFi O____O
Here is our preprint “Minimizer-space de Bruijn graphs”, that will be presented at RECOMB ’21
#SoftwareUpdate MitoHifi now in a singularity container. It will get you a final mito + all the other versions present due to Heteroplasmy. If you have Hifi reads, please try it: git clone --branch mitohifi_v2 github.com/marcelauliano/… @darwintreelife @mcshane @FerreiranunesJ
Lourenço @lramospinto91
139 Followers 413 Following
Marcelo Raffaelli @MarceloRaffael3
1 Followers 50 Following
Anne Liong @AnneMLiong
215 Followers 409 Following PhD student @leao_lab @CiimarUp @ICBAS_UPorto MSc in Molecular and Applied Biotechnology #naturalproducts #cyanobacteria #enzymes I from Germany I @RWTHAlumni
BlueBio4Future @BlueBio4Future
324 Followers 686 Following An #ERACHAIR BlueBio4Future @EU_H2020 funded project that will increase the levels of the research activity in the area of bioengineering at #CIIMAR_UP
Miguel Semedo @miguelsemedobb
203 Followers 244 Following Postdoctoral Researcher in Marine Science. Working on microbial ecology, nitrogen cycle and environmental pollution.
Robert Kraus @rhskraus
15K Followers 16K Following Former scientist Molecular Ecology, Evolutionary Genetics & Genomics. Disease Ecology. Now turned to industry DMS and digitalisation. But still liking science!
Intus Biosciences @Intusbioscience
686 Followers 3K Following Revolutionary microbiome research, discovery and testing, delivering actionable insights and answers for pharma, diagnostic and laboratory partners.
Nair Vilas Arrondo @NairVilas2
180 Followers 295 Following Marine biologist. PhD candidate @IEOVigo @campusdomar @uvigo. PTA at @IIM_CSIC. Marine biodiversity by #genetic tools #elasmobranchs #invertebrates #cetaceans
Sergio Fernández @Due_Sergio
268 Followers 646 Following
Billy 🌹 @nothingclever
1K Followers 2K Following he/him. Geneticist & 1x programmer. Bioinformatics Scientist. I'm not here. @williamrowell.dev on bsky; @[email protected]; @[email protected]
André Santos @AndreMaGoSaP
116 Followers 590 Following
Leão Lab - CIIMAR (U... @leao_lab
825 Followers 521 Following Cyanobacterial natural products chemistry, biosynthesis & ecology Run by lab members!
Pedro Leão @pnleao
329 Followers 465 Following
Flomics @Flomicsbiotech
410 Followers 750 Following Liquid biopsies with cell-free RNA. A revolutionary tool for diagnosis, prognosis and patient stratification.
Rui Faria @RuiMMFaria
578 Followers 666 Following 🧬 Evolutionary biologist primarily interested in the role of chromosomal rearrangements in adaptation and speciation.
Marta Ferreira @MartaSsFerreira
269 Followers 604 Following A Portuguese marine ecotoxicologist in the Pacific, Fiji 🌴🐟🐠🐡
CIIMAR @CiimarUp
2K Followers 712 Following CIIMAR - Interdisciplinary Centre of Marine and Environmental Research - 24 years working at the frontier of Ocean Knowledge and Innovation.
Luca Marcolungo @LucaMarcolungo
63 Followers 166 Following
Bioinfo Googling (TM) @GooglingBioinfo
4K Followers 67 Following Google searches for #bioinformatics "not funny" --physicist "haha I don’t get it" --student "pretty dumb” --pipetter “no” --computer “unoriginal” -- reviewer 2
UniProt @uniprot
11K Followers 560 Following UniProt is the central hub for the collection of functional information on proteins, with accurate, consistent and rich annotation.
ELIXIR UK @ElixirNodeUk
2K Followers 339 Following The UK Node of ELIXIR. Transitioning to LinkedIn and BlueSky Follow us... https://t.co/kJqbhN5ZRi https://t.co/UEkBgsPtUB
NBIS @NBISwe
1K Followers 331 Following National Bioinformatics Infrastructure Sweden, a national #bioinformatics infrastructure supporting life sciences. SciLilfeLab platform. Swedish node in ELIXIR
ELIXIR Norway @elixirnorway
539 Followers 203 Following
BioData.pt @BioDataPT
552 Followers 398 Following We're the distributed Life and Health data research infrastructure for Portugal, and home of Portuguese @elixireurope node. #LivingData
Itai Yanai @ItaiYanai
35K Followers 2K Following Professor at the NYU School of Medicine. Co-host of the 'Night Science Podcast' @nightsciencepod and Co-founder of the Night Science Institute https://t.co/lede3rBmXU
Des Higgins Official @HigginsDes
2K Followers 1K Following Birds and Bioinformatics/genomics/molecular evolution. 1st as amateur twitcher; 2nd since 1985 in TCD, EMBL, EBI, UCC and UCD; Clustal. Now mainly at bluesky
African BioGenome Pro... @DAISEA_AfricaBP
4K Followers 357 Following Genomics in service of conservation & improvement of African biodiversity. Digital Innovation in Africa for Sustainable Agri-Environment & Conservation (DAISEA)
European Reference Ge... @erga_biodiv
3K Followers 903 Following Biodiversity Genomics Community to generate reference quality genomes for all European species. https://t.co/jzc6OWEAkg
Miguel Semedo @miguelsemedobb
203 Followers 244 Following Postdoctoral Researcher in Marine Science. Working on microbial ecology, nitrogen cycle and environmental pollution.
Robert Kraus @rhskraus
15K Followers 16K Following Former scientist Molecular Ecology, Evolutionary Genetics & Genomics. Disease Ecology. Now turned to industry DMS and digitalisation. But still liking science!
Vertebrate Genome Lab... @genomewarriors
712 Followers 179 Following Follow the VGL on our mission to assemble high quality reference genomes for all vertebrate species; guaranteed memes en route 🧬 @RockefellerUniv @genomeark
Javier Santoyo @jsantoyo
6K Followers 898 Following Genomics & Bioinformatics Scientist #Omics #NGS #LongReads | Also @ https://t.co/TCJKash6C1 | Opinions my own. He/Him
Global Invertebrate G... @GIGA_COS
2K Followers 1K Following The Global Invertebrate Genomics Alliance (GIGA) is a collaborative, nonprofit network of diverse scientists studying invertebrate animal genomics.
Itziar Burgues 🪸 @ItziarBurgues
902 Followers 3K Following Bióloga general con sed de mar. Predoctoral Researcher at Centro de Estudios Avanzados de Blanes, @ceabcsic Board Memeber at @RedDocs_CSIC and at @EM_OYSTER
Cole Trapnell @coletrapnell
11K Followers 175 Following working on single cell genomics & developmental genetics at @uwgenome. co-founder, @scalebio
Phase Genomics @PhaseGenomics
3K Followers 1K Following Blueprints for Biology™: Genomics, Metagenomics, Cytogenomics | ProxiMeta™ Metagenome Deconvolution | Proximo™ Genome Scaffolding | Hi-C Kits |
Karen Miga @khmiga
4K Followers 1K Following Associate Professor at UCSC; UC Santa Cruz Genomics Institute; Satellite DNA Biologist
Richard Durbin @richard_durbin
4K Followers 35 Following Computational genomics, population and evolutionary genetics, humans and cichlids. Genetics Dept, University of Cambridge.
B10K @B10K_Project
493 Followers 36 Following The Bird 10,000 genomes (B10K) project is an initiative to generate representative draft genome sequences from all extant bird species.
Bat1k Genome Project @bat1kgenomes
2K Followers 837 Following BAT1K is an initiative to sequence the genomes of all extant bat species 🦇🧬 Header 📸 : B. Fenton 🦇 -account is managed by our project coordinator Meike
Arima Genomics @ArimaGenomics
1K Followers 801 Following Gain unparalleled access to the 3D structure of the genome. Identify how spatial and temporal changes alter gene regulation and cellular function. #3DGenomics
Liz Tseng @Magdoll
4K Followers 1K Following Applications product manager @PacBio. #RNA/#GeneTherapy/#bioinformatics. @uwcse PhD. she/her. Aerialist/pole dancer. Opinions are my own.
Sanger Institute Vert... @SangerVGP
966 Followers 110 Following Vertebrate Genomes Project at Sanger Institute -collab @genomeark. Generating reference quality assemblies across the tree of life (managed by @ilianabista)
Giulio Formenti @giulio_formenti
527 Followers 782 Following
Sergey Nurk 🇺🇦 @sergeynurk
750 Followers 384 Following Senior Applications Bionformatician @nanopore. Ex: Postdoctoral fellow @ NIH; Ex. Researcher @ CAB. Views are my own; #StandWithUkraine Support Ukraine!
Heng Li @lh3lh3
11K Followers 247 Following Associate professor of biomedical informatics at @HarvardDBMI and @dfcidatascience
Parice Brandies @PariceBrandies
213 Followers 204 Following Australasian Wildlife Genomics PhD Student @Sydney_Uni 🐨🧬
Yuanyuan Cheng @Yuanyuan929
366 Followers 219 Following Director of Genomics at BCAL Diagnostics Posts and opinions are my own. ❤️ RNA, long reads, wildlife
Earth BioGenome Proje... @EBPgenome
4K Followers 1K Following Sequencing life for the future of life 🧬 🌲Keep up with all EBP updates 👉 https://t.co/3DtyICIi5W Several EBP-affiliates are on BlueSky 🌍🦋
Darwin Tree of Life P... @darwintreelife
7K Followers 63 Following Generating genomes for all species of animals, plants, fungi and protists in Britain & Ireland. Engage with us!
Sadye Páez María (s... @SadyePaez
695 Followers 1K Following Latina in STEM @RockefellerUniv | Justice, Equity, Diversity, Inclusion + @EBPgenome | Neurobio of Dance @CBA_NYU
Marcela Uliano-Silva @MahUliano
2K Followers 1K Following Find me on BlueSky https://t.co/ID7y5YrBAS | Genome Scientist
Erich Jarvis @erichjarvis
6K Followers 390 Following Brains, genes, spoken language, evolution and dance. Driven to discover how the brain generates and evolves complex behaviors.
Genome 10K @Genome10K
3K Followers 780 Following To understand how complex animal life evolved through changes in DNA and use this knowledge to become better stewards of the planet
Vertebrate Genomes Pr... @genomeark
3K Followers 184 Following Near error-free & complete reference genome assemblies for all living ~70K vertebrates species | got samples/collaborate? https://t.co/TxVm9mYPUm
Molecular Ecology @molecology
7K Followers 4K Following Molecular Ecology publishes papers that use molecular genetic techniques to address consequential questions in ecology, evolution, behaviour and conservation.
Zamin Iqbal @ZaminIqbal
9K Followers 7K Following Professor of Algorithmic and Microbial Genomics at the University of Bath. Pathogens, genomics, genome graphs, antibiotic resistance, algorithms,data structures
Andrew Kern @pastramimachine
14K Followers 3K Following Evolution, population genetics, machine learning. rhythm section.
Nair Vilas Arrondo @NairVilas2
180 Followers 295 Following Marine biologist. PhD candidate @IEOVigo @campusdomar @uvigo. PTA at @IIM_CSIC. Marine biodiversity by #genetic tools #elasmobranchs #invertebrates #cetaceans
Roche Sequencing @RocheSequencing
9K Followers 288 Following
Cell Genomics @CellGenomics
8K Followers 836 Following Cell Genomics is a new gold #OpenAccess and #OpenScience research journal that represents the forefront of #genetics and #genomics 🧬
Hi-C Memes @HiC_memes
742 Followers 169 Following Reasons to study the #3Dgenome: 1. active and helpful Twitter community 2. enthusiasm for open data sharing (2.5 Triangles At Diagonals) 3. 🔥🔥🔥 memes
luisa valente @LuisaMPValente
40 Followers 35 Following
Lourenço @lramospinto91
139 Followers 413 Following
Shaghayegh Soudi - Ph... @ShaghayeghSoudi
207 Followers 365 Following Research Scientist at @StanfordRadOnc #CancerGenomicsEpigenomics #TumourEvolution #softtissuesarcoma #Bioinformatics 🪐🔭 🚴🏻♀️🧘🏻♀️🏃🏻♀️🎾 🎹
Adriana Rego @AdrianaRego10
253 Followers 509 Following PhD student at @leao_lab, @CiimarUp. Bioinformatics of natural products and microbial ecology.You might like
