Axel Martin @CLaunderer
Research biostatistician @sloan_kettering. Specialize in machine learning for predictive genomics. Interested in causal inference methods for ITRs. New York, NY Joined April 2019-
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Axel Martin retweeted
After pulling & QAing #genomics data, the {gnomeR} package (by @Hannah_Fuchs1, @arorarshi, @CLaunderer, @karissawhiting, Mike Curry and more) helps #rstats analysts process it into an analysis-ready format. Docs: mskcc-epi-bio.github.io/gnomeR/index.h… #rstats examples below 👇🧵
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Axel Martin retweeted
Today I want to highlight the {genieBPC} #rstats package by @jessicalavs, @sammi_brown8, @Hannah_Fuchs1, @CLaunderer, @statistishdan, and myself (@karissawhiting). It offers functions for pulling and processing data from the @AACR GENIE BPC Project genie-bpc.github.io/genieBPC/ #cran
Axel Martin retweeted
✨A new release of {cbioportalR} v1.1.0 is now available on CRAN! {cbioportalR} provides #rstats users with user-friendly functions for direct access to genomic and clinical data from the @cbioportal web resource. karissawhiting.com/cbioportalR Updates include: 🧵
Axel Martin retweeted
📢🔥🚨#MSKBiostats @MSKCancerCenter is #hiring a #statistics immuno-oncology postdoc 🔗tinyurl.com/msk-postdoc02 📩A cover letter, cv, and the names of 3⃣references to Dr. Ronglai Shen ([email protected]) 📌Successful applicant will be supervised by Drs. @ronglais & @KPanageas
#WeAreHiring a #statistics immuno-oncology postdoc at #MSKBiostats! To apply, send (1) cover letter, (2) CV, and (3) names of 3 references to Dr. Ronglai Shen ([email protected]) careers.mskcc.org/vacancies/2023…
Axel Martin retweeted
🎉👏 #MSKBiostats @jessicalavs, @sammi_brown8, Mike Curry, @CLaunderer, @statistishdan & @karissawhiting recently developed {genieBPC}, a user-friendly #rstats package for processing complex clinico-genomic data from @AACR Project #genieBPC academic.oup.com/bioinformatics…
Axel Martin retweeted
👀We spy {genieBPC} on this list! #MSKBiostats @jessicalavs, @sammi_brown8, Mike Curry, @karissawhiting, @CLaunderer & @statistishdan collaborated on the {genieBPC} R package, a data processing pipeline for working with the @AACR #GENIEBPC data genie-bpc.github.io/genieBPC/
August 2022: “Top 40” New CRAN Packages {r-bloggers.com/?p=332624} #rstats #DataScience
Axel Martin retweeted
Woohoo!! 🥳 new package alert! #genomics #RStats
Do you work with #genomics data for cancer research? 📢 Check out the first CRAN release of the {cbioportalR} #RStats package to browse and pull @cbioportal data sets directly in R. Examples & docs: karissawhiting.com/cbioportalR/ Feedback Welcome: github.com/karissawhiting…
Axel Martin retweeted
📅 Join us for the next #MSKBiostats seminar next Wed 5/4/2022 10;30am ET with guest speaker @ildiazm on Causal survival analysis under competing risks using longitudinal modified treatment policies 📩 Email Christy Rajcoomar to register: [email protected]
@ArfeAndrea There are so many things wrong with this game...
@MSKBiostats It’s the new desk I think :p
Axel Martin retweeted
The Australien Government has made an ad about Carbon Capture and Storage, and it’s surprisingly honest and informative. #CCS
@gonen_mithat Lambda is coming home (maybe)
Axel Martin retweeted
📣Yours truly made an appearance in this month’s @AmstatNews magazine!! @MSKBiostats @compbiopodcast @92Y check it out - “P is for Podcaster and Potter! And P-value!”. Honored to share a bit about myself 🙇🏻♀️
Axel Martin retweeted
Beyond excited to share our recent paper in @NatureComms on the prediction of the tissue site of origin of cancer tumors using the hidden genome of #rarevariants! Joint work with @CLaunderer, Zoe Guan, @ColinBBegg, and @ronglais. nature.com/articles/s4146… 1/n
Axel Martin retweeted
Using #genomic and #epigenomic meta-features to predict the tissue of origin of cancer from the hidden genome of #RareVariants: new #CancerResearch paper by @SaptarshiCh @CLaunderer @ColinBBegg @ronglais @NatResCancer go.nature.com/3uqzvGo
Axel Martin retweeted
Biostatisticians often get asked, "What exactly do you do?" @rkatlady has a great blog post that breaks down our day (and by hour!). Most of what we do involves: 👩💻🧑💻programming 📝writing 📚reading 🤝meeting & much more!
Revisiting my first blog post, “A Day in the Life of a Biostatistician,” for high school/college students who aren’t sure what a job in biostats might actually entail. To my surprise, I frequently receive emails about this post... 1/2 khstats.com/blog/ditl-bios…
Axel Martin retweeted
Excited (abd a bit nervous!) to be on my very first panel! #ENAR2021
1⃣6⃣ On the 16th, @jessicalavs will participate in a panel discussion on challenges, opportunities and all things career in the statistics/data science field. 🕘9-10:45am Oh, The Places You Could Go: Surprising Careers in Statistics and Data Science 3/4 🧵
@MSKBiostats Great tool for efficient TCGA pancan exploration!
Axel Martin retweeted
My perspective of life in NYC last spring as a biostatistician on Covid-19 response efforts is in this month's @signmagazine. It's very personal writing, but I tried to use my own experiences to capture the escalation and shared emotions of the time.
Katherine Hoffman (@rkatlady) is a biostatistician in the pulmonary and critical care team of a New York City hospital, who found herself part of the #covid19 response when the outbreak first hit in March 2020. This is her story: rss.onlinelibrary.wiley.com/doi/10.1111/17…
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