Integrated Microbial Genomes & Microbiomes (IMG/M) @IMG_DATA
Official account of @jgi's IMG/M data system (at @BerkeleyLab) supporting annotation, analysis and distribution of microbial genome & microbiome datasets. img.jgi.doe.gov Berkeley, CA Joined March 2018-
Tweets321
-
Followers724
-
Following54
-
Likes122
Read in @GigaScience: "MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment." academic.oup.com/gigascience/ar…
Registration is open for the next @jgi Microbial Genomics & Metagenomics (MGM) Workshop, happening April 2025! Details at mgm.jgi.doe.gov
Tick tock: Registration closes Oct. 28 for the @jgi Viral EcoGenomics & Applications (VEGA) Symposium. Will we see you there? More info at jointgeno.me/VEGA2024 Register: jointgeno.me/VEGA2024_Reg2
Read in Current Opinion in Microbiology @sciencedirect: "Tapping the treasure trove of atypical phages" review article from @vivek_mutalik and @simroux_virus @jgi. @berkeleylab sciencedirect.com/science/articl…
ICYMI in @NatureRevMicro Genome Watch from @apcamargo_ @jgi: On plasmid diversity and prevalence, and the challenges in accurately reporting plasmid genomes ID'd from metagenomic data. rdcu.be/dXIOU (Art: Amie Fernandez/Springer Nature Limited)
ICYMI in @NatureMicrobiol: nearly half of the soil samples used to compile the global atlas of soil viruses came from @jgi IMG/M. nature.com/articles/s4156…
👏 👏 Congratulations to the JGI's @frederikschu on his recognition as a 2024 Laureate of the @BerkeleyLab Director's Awards for Exceptional Achievement, honoring his work in microbial and viral genomics. Full list of this year's recipients: recognition.lbl.gov/2024-laureates/
Registration deadline fast approaching for the @SIMB_Microbio Connecting Microbiome Communities conference in San Diego, CA. simbhq.org/cmic/
Reminder that the @jgi #CommunityScience New Investigator call closes Oct. 4. For investigators and research initiatives new to the JGI. Proposals may include synthetic biology, sequencing and metabolomics. More at jointgeno.me/CSPnewPI
2 DAYS left to submit an abstract for the @jgi Viral EcoGenomics & Applications Symposium - don't miss the Sept. 27 deadline. More info at jointgeno.me/VEGA2024 Register: jointgeno.me/VEGA2024_Reg
Tick tock: Registration closes Sept.15 for the @jgi Annual Meeting! Have you signed up for our 1.5-day MGM workshop at the Meeting yet? #JGI2024 REGISTER: jointgeno.me/JGI2024_Reg
Don’t miss @TheHessLab of @ucdavis on “Insights into genetic features that might provide rumen bacteria w/competitive advantages under conditions of methanogenesis suppression” at this year’s #JGI2024 Annual Meeting! REGISTER: jointgeno.me/JGI2024_Reg INFO: jointgeno.me/JGI2024
ICYMI registration is ongoing for the upcoming @jgi Viral EcoGenomics & Applications (VEGA) Symposium in November. Register today - and submit an abstract on your latest viral ecogenomics work to be considered for a short talk! jointgeno.me/VEGA2024
❗Update: Deadline EXTENDED❗ Poster abstracts for the #JGI2024 Genomics of Energy & Environment Meeting are now due Sept. 9 at 11:59pm PT. Submit yours to be considered for a short talk! REG: jointgeno.me/JGI2024_Reg INFO: jointgeno.me/JGI2024 @BerkeleyLab @SSURFacilities
Don’t miss @ferrari_belinda of UNSW Sydney on “Microbial survival strategies at the limits of life” at this year’s #JGI2024 Annual Meeting! REGISTER: jointgeno.me/JGI2024_Reg INFO: jointgeno.me/JGI2024
DYK you can sign up for workshops when you register for the upcoming @jgi Annual Meeting at jointgeno.me/JGI2024_Reg? Don't miss the 1.5-day workshop on using the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows at #JGI2024. jointgeno.me/JGI2024
ICYMI from @ariannakrinos @RobinRohwer @quendi @frederikschu and others in @MicrobiomeJ: Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake. microbiomejournal.biomedcentral.com/articles/10.11…
Don't forget to submit your abstract to the @jgi Annual Genomics of Energy & Environment Meeting by Aug. 31st. Submission details provided in your registration confirmation email. #JGI2024 REGISTER: jointgeno.me/JGI2024_Reg jointgeno.me/JGI2024
Don't forget to sign up for our 1.5-day IMG workshop when you register for the #JGI2024 Genomics of Energy & Environment Meeting. All exercises will be performed using the IMG web user interface. REGISTER: jointgeno.me/JGI2024_Reg
Don't miss our 1.5-day IMG workshop at the #JGI2024 Genomics of Energy & Environment Meeting. Learn more about all the Meeting workshops on offer at usermeeting.jgi.doe.gov/workshops/ REGISTER for our workshop and the @jgi Annual Meeting at: jointgeno.me/JGI2024_Reg
Joint Genome Institut... @jgi
14K Followers 1K Following We are a User Facility providing access to integrative genome science capabilities. Located @BerkeleyLab. Work with us: https://t.co/JliQ4XxSzV
Nikos Kyrpides @kyrpides
2K Followers 536 Following Microbiome, Virome, Bioinformatics, Big Data, Data Science, Open Data, Open Science, “Opinions are mine" #bringthemback
Berkeley Lab @BerkeleyLab
92K Followers 2K Following Official account of Lawrence Berkeley National Laboratory (LBNL), a U.S. Department of @ENERGY national lab.
Antonio Camargo @apcamargo_
566 Followers 374 Following Assistant Professor @usponline. Likes bioinformatics stuff.
stefano campanaro @campanarostef
3K Followers 4K Following Associate prof. in #molecular #biology incl. #genomics #metagenomics #bioinformatics & #methodologies (e.g.#next_gen #sequencing) @UniPadova
European Virus Bioinf... @EVirusBioinfC
6K Followers 347 Following Bringing together the excellence of virology and bioinformatics. Meeting: #ViBioM2025
National Microbiome D... @MicrobiomeData
2K Followers 235 Following Empowering the research community to more effectively harness microbiome data. Official Twitter account of the NMDC.
Jonathan Eisen @phylogenomics
62K Followers 8K Following Prof. @UCDavis studying #phylogenomics #microbiomes #wildlife #marinebiology. Other: #BirdPhotography, #RedSox, #Type1. Past: @harvard @stanford @JohnsHopkins
Simon Roux @simroux_virus
4K Followers 2K Following Virus-obsessed 🇫🇷 bioinformatician, DOE JGI Scientist, Having fun with #metagenomics and other cool #omics. He/him. Opinions my own. simrouxvirus on bsky
@vardilab @vardilab
2K Followers 817 Following The official Twitter account of the Vardi Lab | Microbial Interactions in the Ocean | #phytoplankton #hostvirus #infochemical #stressresponse | @WeizmannScience
Jean-Marie Volland @JeanVolland
831 Followers 951 Following Marine biologist interested in giant bacteria, symbiosis, chemosynthesis and more (Assistant Professor @UCsantabarbara). Tweets are my own.
Daniel Portik @DPortik
2K Followers 3K Following Bioinformatics scientist @PacBio. I work on metagenomics, methylation, and assembly, but also enjoy phylogenomics and frog/lizard evolution. 🦠 🐸 🦎 🧬
MikroBioKosmos _ All ... @mikrobiokosmos
490 Followers 193 Following Hellenic Scientific Society of MikroBioKosmos; all microbes and their environments; Science, Education, Outreach, Networking; FEMS & IUMS member.
Uri Neri @UriNeri2
595 Followers 809 Following Meta/viromics. RNA viruses, Dead Sea, Archaeal viruses, Linux and FOSS. Data scientist @JGI Formerly of Gophna lab @ TAU Mastodon @[email protected]
Gareth (Gary) Trubl �... @gtrubl
2K Followers 1K Following Dad| Staff scientist @Livermore_Lab| #firstgen PhD| He/Him| #Climate| Meta-omics| Stable isotopes| #soil #viruses| Ecology| Biogeochemistry| Astrobio| Geobio
Nigel Mouncey @NigelJMouncey
637 Followers 452 Following JGI Director, SIMB Past President, National Microbiome Data Collaborative, JGI Secondary Metabolites Science Program Head, he/his
Shakshi Sharma @SharmaShak84165
1 Followers 119 Following
Eduardo Aguilar @Eduardojar
218 Followers 965 Following Microbe hunter 🦠 🧬 | Catholic ☦️ | CDMXeño 🇲🇽 ⚾️⚽️🛹 Enthusiast 🌮 🍺 lover
Pia Sen 🧫 pia-sen.... @pia_sen26
733 Followers 1K Following GWU Biology PhD candidate interested in antiviral defense systems & extremophiles • 7x NASA intern • ASMFL fellow • Texas Ex🤘🏽 (UT 2020)
Cris Silva @crisdiwenn
4 Followers 81 Following PhD candidate. I’m working on microbial ecology and genomics
UC San Diego School o... @UCSDMedSchool
2K Followers 413 Following Serving our communities & creating a healthier world through research, education and patient care. MD, MS, PhD, PA, residency and fellowship programs.
Molly Bergum @BergumMolly
537 Followers 577 Following PhD student @TheSainsburyLab | U of Minnesota 2020 | admirer of plants & microbes | she/her
Nadra Hameed @Data_Annotator
3 Followers 95 Following 𝗗𝗮𝘁𝗮 𝗔𝗻𝗻𝗼𝘁𝗮𝘁𝗶𝗼𝗻 & 𝗟𝗮𝗯𝗲𝗹𝗶𝗻𝗴 | 𝗢𝗯𝗷𝗲𝗰𝘁 𝗗𝗲𝘁𝗲𝗰𝘁𝗶𝗼𝗻 | 𝗖𝗼𝗺𝗽𝘂𝘁𝗲𝗿 𝗩𝗶𝘀𝗶𝗼𝗻 | 𝗔𝗜/𝗠𝗟 𝗠𝗼𝗱𝗲𝗹 𝗧𝗿𝗮𝗶𝗻𝗶𝗻𝗴
Probiotics & Gut Heal... @ProbioticsGut
48 Followers 1K Following 16th World Probiotics, Gut Health Conference & Exhibition from December 10-11, 2026 | Kuala Lumpur, Malaysia #PROBIOTICSUCG #guthealth #probiotics
Teardar @Teardarwj_G36
22 Followers 903 Following
Sanjeev Sharma @17SanjeevSharma
56 Followers 197 Following DST-INSPIRE Fellow, PhD Scholar, CSIR-IHBT, Palampur
Chalise House @chalisehouse
12 Followers 174 Following GLOBAL INVESTMENT & TECH ENABLEMENT. Helping mid-market companies accelerate profitable growth with AI.
ONCOSCREEN @oncoscreen
270 Followers 660 Following European "shield" against colorectal cancer based on novel screening methods | Funded by @HorizonEU, grant agreement 101097036 | Views of the project owner only
🦠🧫🦠 @always_learnin
36 Followers 414 Following PhD Student in Environmental Engineering | Phage | All views are my own
TING KUANG YEH @tingkuangyeh
1 Followers 7 Following
まつこ @ma31stm
2K Followers 7K Following 雑草魂weed spirit。人生、あふれる伸びしろ。(ò_ó) おはぎ(サビ猫♀)との暮らしも8年。絶賛プンスカ祭り終盤の高校生の親。日日是好日。臥薪嘗胆。猫神様のご加護の下、猫様にも人間にも幸あれ✨
Charly Emmanuel Mam @CharlyEmmanuel8
42 Followers 548 Following
David Zappulla @dczapp
448 Followers 1K Following Biomedical researcher & professor studying telomerase RNP, telomeres, lncRNAs, & senescence. Opinions are my own, not necessarily those of my employer. (He/him)
💐 Gillian Rowe �... @RoweGill
47 Followers 372 Following PhD Student |🪴 Phytopathologist| The University of the West Indies| 🪴 🔬 ♥️ | 2024 ASPB Plantae Fellow| Girl 👧 👧 Mom💃
Lorenzo Aureli @LorenzoAureli2
57 Followers 85 Following Postdoc fellow in bioinformatics at the DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Abdalrashid @KhAbdalrashid
1 Followers 88 Following
FLOR DE MARIA GUERRER... @FLORDEMARIAGU18
15 Followers 93 Following Research Associate in River's microbiome 🏞 and Anaerobic Digestion systems 🧬🦠 | Resilience |
Life is beautiful! @sndimazz
271 Followers 1K Following Wife to an amazing husband. Vote Red to save America!! 🇺🇲🇺🇲 2A supporter. Rural America is my home 🏡
Nima Azbijari @nazbijar
132 Followers 993 Following ML PhD Candidate @oregonstate Working on genomic language models and twilight zone sequences
Shisew @Shisew9qud
6 Followers 240 Following
Jiaxing Tan @Jiaxing_Tan_
161 Followers 668 Following @UTSWMedCenter @Ling73905865 Structural Biology Cryo-EM/ Immunity / Phages / Antiviral / Molecular machine in immunity #AIforbiology
Morgan Sobol @MorganMicro
660 Followers 727 Following Assistant Professor, Texas State University. Microbial Ecology ◊ Astrobiology ◊ Bioinformatics. Interested in early life evolution 🔭🧬🦠 @msobol.bsky.social
Yasobanta Padhi @kanhapadhi
24 Followers 133 Following PhD in Plant-Microbe Interaction from CDFD, Hyderabad, India
Huyen Nguyen @huyennguyen331
49 Followers 68 Following
Emily @Lirdare_WDwrXG
21 Followers 3K Following
Gritree @GritreeUcVZpF
24 Followers 2K Following
Shirley @Setheartlf5Q
35 Followers 3K Following
Flower @Microbiomrevert
0 Followers 9 Following
Shirley @LaffuezF1wzsD
19 Followers 3K Following
Aileen @SleeshorXkOtVT
27 Followers 3K Following
Emily @SitothorLW
34 Followers 3K Following
Shirley @LearsiiUnwC
31 Followers 3K Following
Nathalie Aoun @Nat_Aoun
304 Followers 474 Following Postdoc in the Lowe-Power lab, @ucdavis, 🧫 🪴 Ph.D. in plants-microorganisms interactions @INRAE_tlse. She / her
Bob Leung @BobLeung4
460 Followers 803 Following Pok Man Leung 梁博聞 | Microbiologist | BSc @hkust | Ph.D @MonashBDI | ARC DECRA Fellow @MonashUni
Pos pijo @obiwanlopez
120 Followers 178 Following
Sheeseigh @Sheeseigh0z6NP
10 Followers 1K Following
Yin Chen @Chen_group
2K Followers 1K Following Views of my own. Microbiologist. Random tweets on science, higher education & football. Views of my own.
Captivating melodies ... @moons281642
112 Followers 311 Following
Mitra Ghotbi @GhotbiMitra
865 Followers 2K Following Passionate about Soil-Plant-Microbe Interactions | Microbial Ecologist | Postdoc fellow | R package developer & coding enthusiast | Always curious and learning!
Shemee @shemeekinz
1 Followers 51 Following
A SAHA @Biologist_AS
9 Followers 208 Following
Yan Xia @YanXia51233812
3 Followers 108 Following Focus on the bioinfomatics and the apply on the gut metagenomics
Chrispin Chaguza @ChrispinChaguza
2K Followers 5K Following Principal Bioinformatics Research Scientist & Director of Microbial Bioinformatics at Host-Microbe Interactions Dept. at St Jude Children's Research Hospital
LeeDulles @h86K7706uQ9jnW5
68 Followers 7K Following
Joint Genome Institut... @jgi
14K Followers 1K Following We are a User Facility providing access to integrative genome science capabilities. Located @BerkeleyLab. Work with us: https://t.co/JliQ4XxSzV
Nikos Kyrpides @kyrpides
2K Followers 536 Following Microbiome, Virome, Bioinformatics, Big Data, Data Science, Open Data, Open Science, “Opinions are mine" #bringthemback
Berkeley Lab @BerkeleyLab
92K Followers 2K Following Official account of Lawrence Berkeley National Laboratory (LBNL), a U.S. Department of @ENERGY national lab.
Asaf Levy אסף לו... @AsafLevyHUJI
3K Followers 624 Following Interested in computational biology, microbial toxins, and plant microbiome. PI at the Hebrew University of Jerusalem. Expressing my personal opinions.
Antonio Camargo @apcamargo_
566 Followers 374 Following Assistant Professor @usponline. Likes bioinformatics stuff.
ASM @ASMicrobiology
91K Followers 279 Following ASM is a global community shaping the future of the microbial sciences to tackle some of the world's most pressing challenges. Microbes Make Our World.
stefano campanaro @campanarostef
3K Followers 4K Following Associate prof. in #molecular #biology incl. #genomics #metagenomics #bioinformatics & #methodologies (e.g.#next_gen #sequencing) @UniPadova
National Microbiome D... @MicrobiomeData
2K Followers 235 Following Empowering the research community to more effectively harness microbiome data. Official Twitter account of the NMDC.
Jonathan Eisen @phylogenomics
62K Followers 8K Following Prof. @UCDavis studying #phylogenomics #microbiomes #wildlife #marinebiology. Other: #BirdPhotography, #RedSox, #Type1. Past: @harvard @stanford @JohnsHopkins
Simon Roux @simroux_virus
4K Followers 2K Following Virus-obsessed 🇫🇷 bioinformatician, DOE JGI Scientist, Having fun with #metagenomics and other cool #omics. He/him. Opinions my own. simrouxvirus on bsky
Nigel Mouncey @NigelJMouncey
637 Followers 452 Following JGI Director, SIMB Past President, National Microbiome Data Collaborative, JGI Secondary Metabolites Science Program Head, he/his
Irene Papatheodorou -... @irenepapatheodo
804 Followers 938 Following Head of Data Science @EarlhamInst #bioinformatics #opendata // views my own
The Microbiome Center @microbiomecntr
3K Followers 635 Following UChicago, the Marine Biological Laboratory, and Argonne National Laboratory - Collaborating to explore the power of microbes across environments.
Michael Rappe @mikerappe
1K Followers 464 Following microbial diversity, marine microbes, deep subseafloor, population genomics, father of four, husband to one
Uri Gophna @ugophna
411 Followers 138 Following Evolutionary microbiologist and ecologist at TAU, Member of EAM,AAM,EMBO. #archaea; #CRISPR; #CBASS
Hila Sberro @HSberro
70 Followers 134 Following
Alexandre Soares Rosa... @Rosado_AS
3K Followers 1K Following Microbiologist -Professor of Biosciences at @kaust_news Extremophiles • One & Planetary Health From Earth’s extremes to space—and back @MegbLab
RokasLab @RokasLab
3K Followers 447 Following The Laboratory of Antonis Rokas at Vanderbilt University. Tweets should be interpreted as bookmarks, not as endorsements. All opinions are Antonis'.
Amy Proal, PhD @microbeminded2
30K Followers 5K Following Microbiologist at @polybioRF: studying how persistent pathogens drive inflammaging, mitochondrial dysfunction & cognitive decline #longcovid #lyme #alzheimers
One Health Microbiome... @PSUmBiome
3K Followers 1K Following The One Health Microbiome Center at Penn State optimizes, accelerates, and disseminates microbiome applications and knowledge. On BlueSky | LinkedIn | YouTube
Dr. Linnea K. Hernand... @Linneakh80
435 Followers 648 Following Scientist and mom. Doing soil bioinformatics @LLNL with interest in impacts of global change on microbial carbon (plus the volatiles!) cycling dynamics.
Dr. Clarice Perryman @ClaricePerryman
1K Followers 1K Following ✨Thinking about methane cycling & emissions in a warming world | https://t.co/nTO6eBgWFF | she/her ✨
Chelsea Smith @C_Smith287
86 Followers 372 Following Postdoc @KentState studying carbon stabilization with metals (Fe/Mn) in Arctic lakes in the @ksubosslab. #NatGeoExplorer
SIMB @SIMB_Microbio
1K Followers 167 Following Int'l association dedicated to the advancement of microbiological sciences, as they apply to industrial products, biotechnology, materials, and processes.
UC Davis Microbiome @UCDMicrobiome
816 Followers 539 Following All microbiomes, all the time | Tweets Informational ≠ Endorsements | Director: @phylogenomics | #UCDmicrobiome
Rodrigo Costa @MicroEcoEvo_Lab
275 Followers 212 Following Professor at Instituto Superior Técnico (IST), University of Lisbon. Head of the Microbial Ecology and Evolution Team (MicroEcoEvo). Symbiosis&Metagenomics
Joanne Emerson @jemersonmicro
2K Followers 2K Following Associate Professor @UCDavis, microbial/viral ecologist, fan of the outdoors, she/her
INRAE Microbiologie e... @INRAE_DPT_MICA
973 Followers 282 Following #MICA Département Microbiologie et Chaîne Alimentaire d'@INRAE_FRANCE : Institut National de Recherche pour l'#Alimentation, l'#Agriculture & l'#Environnement
Michalis Hadjithomas @michalis_h
148 Followers 150 Following Vice President, Head of Genomics at LifeMine Therapeutics - Fungal Biosynthesis - Bioinformatics & Computational Biology
TBK Reddy @tbk_reddy
79 Followers 106 Following Genomic Standards Group Lead. Bioinformatics, Biological Databases, Microbiome, Metadata Management, Controlled Vocabularies and Ontologies. Views are my own.
Daniel McDonald @mcdonadt
1K Followers 1K Following Scientific Director of the American Gut Project and The Microsetta Initiative; Knight Lab; UC San Diego Dept. of Pediatrics. he/him. Tweets are my own.
MGnify @MGnifyDB
2K Followers 139 Following MGnify is a free resource for the assembly, analysis, archiving and browsing of microbiome derived sequence data. Service status: https://t.co/nFJI4qFajO
GSC @genomestandards
599 Followers 115 Following Genomic Standards Consortium, international community for the development and promotion of genomic standards.
The Pfam database @PfamDB
2K Followers 1K Following The Pfam Protein Families database. Providing protein family HMMs since 1996.
CAMI Challenge @CAMI_challenge
471 Followers 68 Following Critical Assessment of Metagenomic Interpretation
Dawn Field @fiedawn
786 Followers 638 Following PhD, scientist, writing, equality, Biocode, https://t.co/jRcDchqMl9
Mosaic Microbiome @mosaicbiome
161 Followers 37 Following A cloud informatics platform providing a secure & collaborative space where researchers can develop, improve, compare, & share methods in microbiome research.
Lynn Schriml @lschriml
192 Followers 239 Following
Tanja Woyke @twoyke
429 Followers 244 Following
Berkeley Lab Computin... @LBNLcs
12K Followers 991 Following Driving innovation in math, computational science, computer science, and data science. Home to NERSC & ESnet. Advancing research with HPC & cutting-edge tech.
Aydın Buluç @aydoz
975 Followers 491 Following Senior Scientist @berkeleylab, Adj. Faculty @Berkeley_EECS. Parallel computing, sparse matrices, graphs. #firstgen #immigrant. PI of https://t.co/HpWgttuwVu
NERSC @NERSC
11K Followers 311 Following Official Twitter of the National Energy Research Scientific Computing Center, @doescience’s primary scientific computing facility. HQ @ENERGY's @BerkeleyLab.
Microbiome News @microbiome_news
10K Followers 1K Following Source for Microbiome research news and information. Organizer of the Annual Translational Microbiome Conference. #microbiomecon #microbiome #microbiota
Microbiome @MicrobiomeJ
21K Followers 2K Following A family of journals from @BioMedCentral that seek to unite investigators conducting microbiome research in environmental, agricultural, and biomedical arenas.
Frederik Schulz @frederikschu
493 Followers 857 Following AI/ML, Biosecurity, New Lineages of Life, Enigmatic Microbial Symbionts and Viruses @ DOE Joint Genome Institute
LBNL BioSci @LBNLBioSci
3K Followers 393 Following Official Twitter account of the Biosciences Area of @BerkeleyLab solving challenges in energy, environment, health, and biomanufacturing. Retweet ≠ EndorsementYou might like
