James @basedsystems
cofounder @hoxbio | building integrated systems for discovery, health, and security Joined December 2024-
Tweets221
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Followers644
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Following194
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Likes1K
@gbrl_dick It is kind of amazing how quickly TOP500 computers got outpaced by commercial. el capitan is probably 10x smaller now
@gbrl_dick just put the booze in the bag lil bro
made digital, web version of deck. pretty rad
@iskander @cassidoo @courtnelc mine used to say exactly this lol
@shakoistsLog Almost all categories lack “well specified definitions” Necessary and sufficient conditions are reserved for math and law
@Ginkgo @OmicsOmicsBlog @PharmaTechFocus @jrkelly sweet Jason
@anshulkundaje I know a guy who figured out how to generate the structures dataset without crystals. So, there will be much larger datasets in a bit of time
putting this tweet on the wall in the office
downtown livermore feels a little like Palo Alto with shittier cars
@SashaGusevPosts will be a lot of this. probably need a way for centralized domain expertise to reach out to the datasets and pick at them live as like a service
when the kids are destroying the house but also leaving you alone so you gotta decide if you’re gonna get up and do something about it
@bazarovturg also, we rip apart how the standard software works because we need to optimize for correctness in our services. often you dig in and find missing knobs or broken / complex code
@bazarovturg we use it to run various internal services. better to just write a new, efficient one that integrates with the rest of our stuff
We wrote our own hyper-efficient version of the STAR aligner. Typically it costs around $35 in cloud compute to process 30k cells with Cell Ranger. Ours costs so little that we don't charge for it. Also ours works with nanopore. If you prefer pseudoalignments, then you can run it in pseudoalignment mode -- obviously we don't charge for that too. All results instantly integrated with our other tools. As soon as a run finishes you can open alignments or expression matrices in our viewers without moving anything. Let me know if you want to try it!
@wannabe_ary @chapmanb I’ll make sure we support pip-seq geometry
@KiaNeu6 it’s something like 100x more efficient
Cammy 👗 @RentschlerTerry
76 Followers 2K Following anxious angel with good music taste 👼 follow back
satyam @satiyum
540 Followers 2K Following data for robotics and health unlock the future we need. founder, https://t.co/ji2txiGF8Q, https://t.co/7eH2e6LVXg, https://t.co/AciEw5Exhq
Riya Bisht @b1shtream
2K Followers 5K Following accelerating biology using AI/computing @join_ef, neuromorphic @CeNSEatIISc, VC @Lvlupvc, @iiscbangalore,prev @Vicharak_In @CERN @BerkeleyLab, @ucberkeley
Piotr Kopec @gc_content
9 Followers 133 Following
Hanlon's Laser @aphofer
1K Followers 2K Following If you hand me any basket of beliefs, I’m going to start throwing some out.
Jan Vincent Beltran, ... @levin_beltran
12K Followers 13K Following PostDoc at UPenn 🇺🇸 | PhD in Molecular Medicine | Single-Cell Bioinformatics | Immunology | Cardiology | Oncology | Therapeutics
Clare Robinson @KlondikeClare
224 Followers 1K Following
Tom Knight -- e/🦀�... @TomKnightSynBio
3K Followers 4K Following Engineer of stuff that is alive or computes. Follow us all to that blue place.
Em doing things @Kelli1911795182
87 Followers 2K Following stardust soul with sleepy energy ⭐ follow back always
CRISPRKing @CRISPRKING
12K Followers 3K Following building comp infrastructure to cure diseases go bears
F.Sancho @Sanchificator
95 Followers 2K Following
arindam007 @wannabe_ary
195 Followers 927 Following Post-Doc | Bioinformatics | NLP |Bacterial Phenotypes | Photographer | Traveller
Nishant Jha @parambulat0r
195 Followers 377 Following Software engineer based in Pasadena, CA. My work serves research scientists at the bench and the keyboard. https://t.co/d7aD9sR9uS
Wo B @WoB1687969
15 Followers 1K Following
Symplectic Manifold o... @MaxDiffusionRL
818 Followers 3K Following Parrot. Likes surplexity. Wealth of weak ties. Eclectic af. Likes the unbenchmarked. Puts FEP/Hessians/Fisher info into their Claude prompt
Yingke Ma @heatingtube
62 Followers 1K Following
Daniel Spies @bioinfWizard
68 Followers 325 Following bioinformatic with diverse interests, now working on cystic kidney diseases
Omar Abudayyeh @omarabudayyeh
9K Followers 5K Following building biomedical superintelligence | AI x Bio x Longevity | @harvardmed @MIT @broadinstitute
Dr. Shibichakravarthy... @shibi76
936 Followers 4K Following #Entrepreneur, Cancer Research Scientist, Computational Biologist, Immuno-Oncology, CAR T Cells, Gut Microbiome, Nanopore Sequencing Pathogen Detection & AMR
Robert Corty @rheumrob
496 Followers 1K Following instructor of rheumatology interested in somatic mosaicism
Russell Goodman @russpgoodman
525 Followers 477 Following Hepatologist and scientist at MGH studying hepatic metabolism in liver disease. Per reviewer #2, "No particular expertise in liver disease or metabolism".
yakuhito🌱 @yakuhito
2K Followers 2K Following Give a yak some chocolate and you'll make him happy for a day. Teach a yak how to use Twitter and this is what happens. | @TibetSwap @warpdotgreen
soup @tidepoolsoup
547 Followers 1K Following
davidgcorr @davidgcorr
95 Followers 2K Following Father, Aerospace Engineer, Entrepreneur, Data Scientist, AI Researcher and Algorithmic Trader I talk about AI, Tech, SaaS, and Professional Development
Gagandeep Singh @GaganZingh
108 Followers 864 Following
Florian Uhlitz @fuhlitz
253 Followers 714 Following Computational Biology Team Lead @Immunaitech - Before w @SohrabShah at @MSKCancerCenter and w @MolSysBio at @ChariteBerlin. he/him @[email protected]
Tom Willis @twillis209
281 Followers 1K Following GWAS, genetic architecture, pleiotropy, that sort of thing.
Arash Bagherabadi @arash_b_abadi
133 Followers 765 Following PhD student @UABImmunology | Single-cell & Spatial Transcriptomics | Immunology and Cancer | Goes by Arash B. Abadi | https://t.co/uZ44VCBNxb
Alberto Souza Boldt @alberto_boldt
99 Followers 5K Following
Colin Naughton @NostraNaughton
127 Followers 2K Following BIOINF PhD candidate. Former wet lab wizard. Daddio. Views rock.
Yevgen Zolotarov @zolotarov
37 Followers 375 Following Father. Biochemist. Working on accessible biologics at Neion Bio 🇺🇦➡️🇨🇦➡️🇺🇸
Ryan Reis @Ryan_J_Reis
294 Followers 2K Following Jabbari Lab @ Carver College of Medicine MSTP M6G | Cancer, Bioinformatics, Immunology, Translational #singlecell #omics #Research
HypoOriginal @HypoOriginal
54 Followers 566 Following
Alex Predeus 🇺🇦 @APredeus
736 Followers 1K Following Moscow State - Michigan State - WashU Pathology & Immunology - Bioinformatics Institute SPb - University of Liverpool - Wellcome Sanger Institute
383747194484 @4837262584i5
5 Followers 820 Following
Kevin McKernan @Kevin_McKernan
122K Followers 3K Following Cannabis Genome Project,2011. SOLiD sequencer. R&D lead Human Genome Project at MIT/WIBR. Founder- Medicinal Genomics.
Riya Bisht @b1shtream
2K Followers 5K Following accelerating biology using AI/computing @join_ef, neuromorphic @CeNSEatIISc, VC @Lvlupvc, @iiscbangalore,prev @Vicharak_In @CERN @BerkeleyLab, @ucberkeley
Nathan C. Frey @nc_frey
5K Followers 2K Following on the Second Quest @AnthropicAI | previously CTO & Co-Founder @CoefficientBio (acq. by @AnthropicAI) | ex-@Genentech | @MIT @Penn
Elliot Hershberg @ElliotHershberg
19K Followers 962 Following Partner @AmplifyPartners, writing https://t.co/LSbi0EEiHU
Simon Barnett @SimonDBarnett
3K Followers 2K Following Partner + Head of Research @_DimensionCap | Focused on the Intersection of Compute + Bio | Prev: Public Biotech Investor | Chemical Engineering @JohnsHopkins
Eryney (NYC 7/1-8/31) @eryney_ok
2K Followers 613 Following pronounced like "aaron a” | writing @corememory, medicine @UVMvermont | bio stuff at @dyno_tx @harvard @caltech
Meena Rancourt @MeenaRancourt
56 Followers 39 Following Blending creativity and professionalism- turning bold ideas into polished results.
sina @sinabooeshaghi
4K Followers 1K Following bio/ai postdoc at uc berkeley. prev. phd from caltech and math + me from mit.
Alan DenAdel @AlanDenadel
290 Followers 1K Following Bioinformatics scientist @AllenInstitute. PhD in computational biology from @BrownCCMB @BrownUniversity. Previously at @illumina. he/him
Michael Mignano @mignano
62K Followers 707 Following General Partner @USV. Co-Founder Anchor (acquired by Spotify) and @OboeLabs. Early investor in @meetgranola, @suno, @xai, others.
Nishant Jha @parambulat0r
195 Followers 377 Following Software engineer based in Pasadena, CA. My work serves research scientists at the bench and the keyboard. https://t.co/d7aD9sR9uS
Jack O'Meara @Jack_O_Meara
3K Followers 2K Following CEO/Cofounder @AerskaTx, RNAi for brain diseases; Cofounder @OchreBio, AI for liver biology
John Cumbers @johncumbers
19K Followers 2K Following The room where bio partnerships get made. F500 BD, VCs, and 2,000 founders — all in San Jose, May 4–7. https://t.co/wdTABwo6of
pumpkin spice lemy �... @nirvanaWaterBtl
40 Followers 170 Following
Denis Wirtz @deniswirtz
47K Followers 8K Following VP for Research @JohnsHopkins, T.H. Smoot Professor @HopkinsEngineer & @HopkinsMedicine, Co-founder @INBT_JHU, Lab: https://t.co/9OtmgB6InU Tweets are my own.
Alon Turing @chaumian
6K Followers 690 Following deceased gay man. invented compute then killed myself
Florian Uhlitz @fuhlitz
253 Followers 714 Following Computational Biology Team Lead @Immunaitech - Before w @SohrabShah at @MSKCancerCenter and w @MolSysBio at @ChariteBerlin. he/him @[email protected]
Kevin McKernan @Kevin_McKernan
122K Followers 3K Following Cannabis Genome Project,2011. SOLiD sequencer. R&D lead Human Genome Project at MIT/WIBR. Founder- Medicinal Genomics.
Heng Li @lh3lh3
11K Followers 240 Following Associate professor of biomedical informatics at @HarvardDBMI and @dfcidatascience
Lior Pachter @lpachter
71K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
Gian Marco Visani @GMarcoVisani
169 Followers 376 Following Chef wannabe. Scuba diver when I can. PhD on ML for protein structures @uwcse in my spare time
Sergiy Velychko @velychko_s
473 Followers 471 Following Co-founder & CEO of SOXOGEN Stem cell & synthetic developmental biologist
Regev Schweiger @RegevSchweiger
307 Followers 744 Following PI at the Faculty of Medicine and School of CS and AI at @TelAvivUni 🧬 Principal Scientist at @MyHeritage
Mathurin Dorel @MathSRIsh
370 Followers 2K Following Bioinformatician, Cellular Biologist, CSO @tychobio_ai @[email protected] @mathsrish.bsky.social
Cristian Ponce @c_m_ponce
1K Followers 276 Following Working on building an automated biology lab that you can send experiments to, from your web browser. CEO @ https://t.co/kRn59DDior.
Sebastian S. Cocioba�... @ATinyGreenCell
32K Followers 10K Following Flower Designer at Neoplants ♧ Researcher at Binomica Labs ♧ Degreeless Heathen ♧ Petunia and Snapdragon Breeder ♧ Open Lab Notebook: https://t.co/umYTLluuuw
Vince Buffalo @vsbuffalo
38K Followers 3K Following Scientist at IDM ♥s epidemiology, running, prob+stats, 🦀/🐫, fly fishing, greyhounds, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Deniz Kural @denizkural
2K Followers 5K Following Biologist (PhD), mathematician, GP https://t.co/ZCdmVsX9uh co-founder https://t.co/WnMDUFWSpr, former: founder @totientbio, founder @sevenbridges
Ming "Tommy" Tang @tangming2005
46K Followers 3K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Silvi Rouskin @silvirouskin
14K Followers 1K Following Asst. Prof. at Harvard Medical School. #RNA biology#viruses #AI # https://t.co/Ihy7mZhjL5 @harvardmicro ; opinions are my own. https://t.co/9lMkSHvpn9
Jakob Steinfeldt, MD @SteinfeldtJakob
262 Followers 1K Following Medical Doctor & Scientist | Data and evidence in medicine | Building @PheironInc | via @ChariteBerlin, @berlinnovation, @UniFAU
Florian @fvderop
352 Followers 1K Following Data maximalist @ https://t.co/AaBZd0AWld, person @ https://t.co/DLE0O7ETFk
Anshul Kundaje @anshulkundaje
31K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Mike Cuoco @cuoco_michael
356 Followers 1K Following PhD Candidate in Bioinformatics and Systems Biology with Rusty Gage @salkinstitute and @emukamel @UCSanDiego. @NSF Graduate Research Fellow.
Ashish K. Jha @ashishkjha
277K Followers 628 Following Physician, scientist, biosecurity expert. Co-founder, BioRadar. Because an ounce of data is worth a thousand pounds of opinion.
Michael Baym @baym
23K Followers 2K Following Microbiology, evolution, antibiotic resistance, applied math, molecular biotech. Associate Professor @HarvardMed. Basic research is the engine of progress. 🦠🧬
andrew hedin @andrewhedin
2K Followers 794 Following biotech, healthcare, buffalo bills, venture capitalist @BessemerVP
NIMI VASHI (bio/acc t... @nimivashi15
5K Followers 6K Following Building Manufacturing for Biologic Drugs in 🇺🇸 . @ Stealth Biotech. Alum: @mskcancercenter @icgeb. Cancer expert @bbcworld. Bio/Acc to infinity & beyond.
Michael Koeris @mkoeris
6K Followers 540 Following Director of the Biological Technologies Office @DARPA. Serial founder Sample6 (acq.), Corvium (acq.), GDMC (merged); frm. Prof @KeckGrad & BOD @addgene!
Dr. Gerald Parker @DrGerryParker
2K Followers 1K Following Associate Dean, @TAMUOneHealth, College of Veterinary Medicine & Biomedical Sciences; Director, Pandemic & Biosecurity Policy Program, @ScowcroftTAMU; @TAMU '76
Matthew F. McKnight @matt_f_mcknight
2K Followers 989 Following CEO at https://t.co/qD0K7OzNOp Building biosecurity for the bio-century I like --- https://t.co/BYgu3I16Jc...RT or Like=interesting but not necessarily agreement.
Vijay Pande @vijaypande
35K Followers 1K Following Co-Founder at @VZVCfund. Investing in companies solving humanity’s biggest problems, led by founders hell bent on bending the curve.
Max Nadeau @MaxNadeau_
2K Followers 565 Following Funding research to make AIs more understandable, truthful, and dependable at @coeff_giving.
Shea Wihlborg @Shea_ARK
6K Followers 153 Following Multiomics analyst @ARKInvest focused on identifying disruptive innovations that could reshape the future of medicine | Disclosure: https://t.co/sPOP1gVoCR
Heiner Lippman @heinerlippman
866 Followers 1K Following driven by dreams never end | founder https://t.co/3S1UxSDfuT | founder https://t.co/HF1qSnCSlnTrends for United States
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