Sebastian Burgstaller @sebotic
Former postdoc @scrippsresearch, now postdoc @viennabiocenter, bioinformatics, deep learning, disease & phylogenomics, NGS, @Wikidata, crowdsourcing, R, Python github.com/sebotic Vienna, Austria Joined September 2012-
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I m happy to present our latest preprint, and the main work of my PhD-project: "GTestimate: Improving relative gene expression estimation in scRNA-seq using the Good-Turing estimator" In this manuscript we introduce a new normalization method for scRNA-seq data.
GTestimate: Improving relative gene expression estimation in scRNA-seq using the Good-Turing estimator biorxiv.org/cgi/content/sh… #biorxiv_bioinfo
@andrewsu I intended to convey that I found the atmosphere at the meeting depressing, from the very beginning. Hope that helps, Andrew!
@andrewsu Q: But you were still using the sentence that you felt treated very unfairly (discriminated against?). A: Using the term "very unfairy treatment/discriminated against" was a mistake. Unfortunately, I did it because I had the article of CNV infront of me.
Building a Rust-y Vim clutch with the Raspberry Pi 2040 by Chris Price: blog.scottlogic.com/2022/12/08/bui… #embedded
Today, we’re introducing a new model that eliminates accept/reject decisions. By publishing every paper with eLife reviews as a Reviewed Preprint, we plan to restore autonomy to authors, ensuring that they will be judged by what, not where, they publish. elifesciences.org/inside-elife/5…
New open-source language model from Google AI: Flan-T5 🍮 Flan-T5 is instruction-finetuned on 1,800+ language tasks, leading to dramatically improved prompting and multi-step reasoning abilities. Public models: bit.ly/3sbNPDJ Paper: arxiv.org/abs/2210.11416
My matrix visualizations with MIT Gilbert Strang. I compiled the graphics in a short(14-page) PDF paper! github.com/kenjihiranabe/…
1/ You’ve sequenced your samples and identified variants. Great! 🙌 Now, here's how you can use @ensembl to find out the effect of your variants on #protein structures and interactions. A thread...🧵 #genomics #bioinformatics #tweetorial #Ensembltraining 🧬
Happy to share our preprint showing improvement of variant calling and expression analysis by fixing errors in GRCh38 reference. With @sedlazeck, Justin Zook @NIST @meganamsu Jonathan LeFaive, Peter Orchard @MedhatHelmy7 @lfpaulin @dcsoto_cl @BCM_HGSC biorxiv.org/content/10.110…
Two years in the making, my take at illustrating bird phylogeny: deviantart.com/albertonykus/a…
I have waited this, for 20 years 🤣. Still, thanks to @nvidia for finally getting this done!
We are excited to publish the Linux GPU kernel modules as #opensource with dual GPL/MIT license, starting with the R515 driver release. You can find the source code for these kernel modules in the NVIDIA Open GPU Kernel Modules repo on GitHub. nvda.ws/3swPGDO
We reveal your models of sequence #evolution. Our latest contribution to #phylogenetics using #DeepLearning: "ModelRevelator: Fast phylogenetic model estimation via deep learning" biorxiv.org/content/10.110… #NeuralNetworks #phylogenomics
Hot off the press: Can we use weak supervision to extract large-scale datasets from social media? Turns out we can do this for tweets with drug mentions! great work by @ramyatekumalla published on the @_LXAI research special issue link.springer.com/article/10.100…
And there is even a competitor #neuralnetwork for #proteinfolding, published in @ScienceMagazine science.sciencemag.org/content/early/…
Finally, the alphafold2 paper has been released: nature.com/articles/s4158… #deeplearning #MachineLearning #proteinfolding #AI
From our campus: Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq. #SARSCoV2 #COVID19 nature.com/articles/s4146…
Twenty years since the official first draft of the human genome, a groundbreaking effort on many levels. #humangenome #genomics #bioinformatics nature.com/articles/d4158…
Die absoluten Zahlen steigen bisher nicht in Österreich. Jedoch verdrängen die Varianten kontinuierlich die herkömmlichen Viren. Das läßt vermuten, daß der bisherige Lockdown zwar funktioniert, aber nicht effektiv genug für Varianten mit erhöhter Infektiösität ist. 6/7
Dan Brickley @danbri
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Journal of Translatio... @OfGenomics
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Lifebit @lifebitAI
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Steve Grossman @stevenjgrossman
2K Followers 3K Following Also find me (@)https://t.co/8TVq95hzv5 - Interested in #RareDisease, #ADCY5, #outdoors, #soccer
Tiffany Callahan @Tiff_callahan
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UniProt @uniprot
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5K Followers 332 Following Husband. Dad. Abstract Wikipedia at WMF. Founder Wikidata. Prvsly: ontologist at Google, Wikimedia Trustee, RPG author. Q18618629. Views mine. @[email protected]
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349K Followers 1K Following Viruses, viruses, viruses and vaccines. V5=3xancestral+1x bivalent+1xXBB Professor at the Department of Microbiology Icahn School of Medicine at Mount Sinai
Peter Murray-Rust @petermurrayrust
4K Followers 109 Following a chemist interested in semantic web and open scholarship (open data). Bearsuit carries placards for justice. Unless we fight we perish
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Núria Queralt Rosina... @nqueralt
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Journal of Cheminform... @jcheminf
3K Followers 18 Following Tweets from Editors-in-Chiefs Rajarshi Guha & Barbara Zdrazil & Publishing Editor Maggie Zhang.
NCBI @NCBI
74K Followers 82 Following Official account of the National Center for Biotechnology Information at @NLM_NIH. Privacy: https://t.co/HCI6YakCFK | Website help: [email protected]
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Google Gemma @googlegemma
96K Followers 0 Following The official home of Google's Gemma. Lightweight, state-of-the-art open models by Google DeepMind, built on Gemini tech. What will you build? 🚀💻
PS01 □ @PStyle0ne1
92K Followers 65 Following I was cool but then Russia invaded the country of my ❤️. Expert in economics & history & international relations. Not an academic here.
MAKS 26 🇺🇦👀 @Maks_NAFO_FELLA
342K Followers 7K Following ☕️ https://t.co/lxtbRwUkm3 🇺🇦PayPal: [email protected] 👀 https://t.co/rMYZMXeCTf
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Herbert B Schiller @SchillerLab
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drug hunter @drughunter_com
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Aleph Alpha @Aleph__Alpha
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BigScience Research W... @BigscienceW
14K Followers 1 Following A research workshop on large language model gathering 1000+ researchers around the world Follow the training of the 176B multilingual model live @BigScienceLLM
Papers with Code @paperswithcode
113K Followers 10 Following Our mission is to organize science by converting information into useful knowledge.
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NASA Webb Telescope @NASAWebb
3.5M Followers 63 Following The Official *NASA* Webb X account. The world's most powerful space telescope. Launched: Dec. 25, 2021. First images revealed: July 12, 2022.
Andreas Bergthaler �... @abergthaler
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