Aquatic metabolomics and mass spectrometry. Natural & synthetic compounds in water. At Athens Water (EYDAP SA). Our own views. Also @aquomixlab.bsky.socialaquomixlab.com Athens, Greece
Joined June 2024
🎅🎅🎅📢📢📢
BCCM/ULC is getting ready to welcome 2025 with an amazing offer for everyone working with "basal" cyanobacteria!
Deposit your strains at ULC and get genomic services for free🎁🎁🎁
More details, terms & conditions 👇👇👇
Please RT!
#cyanobacteria#evolution
Studying the evolution of 'basal' cyanobacteria?
This BCCM/ULC Christmas offer is for you!
Get FREE state-of-the-art genomic services in return for depositing your basal unicyanobacterial strain(s) during 2025.
Conditions: bccm.belspo.be/images/ulc/off…
Contact: [email protected]
Happy New Year to Everyone! This is the year that will bring us all together in Crete, Greece for the 13th ICTC!
The clock is ticking, we are excited!
Don't forget: the final deadline for abstracts and grants is January 10th!
#cyanobacteria#conference
Dear all,
as the ICTC13 deadline is approaching, we are truly excited to see more and more abstracts submitted!
Don't forget to submit your abstracts by December 20th, 2024!
#cyanobacteria#ictc13
More at: ictc13.gr
📢 Last webinar of the year!
On the 11th of Dec at 4 pm UTC, we will host Daniel Petras and Paolo Stincone who will deliver their talks on the use of their functional metabolomics tools.
✒️ You can freely register here: zoom.us/webinar/regist…
Looking forward to seeing you!
Happy to share with you the first official photos of our new Omnitrap! Big shootout to the @fasmatech_omni team for this amazing technology! Now let's add lasers and see what it has under the bonnet for oligonucleotide analysis 😊
📢 Last webinar of the year!
On the 11th of Dec at 4 pm UTC, we will host Daniel Petras and Paolo Stincone who will deliver their talks on the use of their functional metabolomics tools.
✒️ You can freely register here: zoom.us/webinar/regist…
Looking forward to seeing you!
We are excited to announce our upcoming workshop designed to be interactive and beginner friendly. We will introduce Reverse Metabolomics, a novel approach to identifying microbial metabolites using mass spec. We will show YOU how to identify and categorize microbial metabolites!
27 life scientists have been selected as the newest members of the EMBO Young Investigator Programme. Congratulations and welcome!
Read more:
embo.org/press-releases…
More great news from @tomas_pluskal of @IOCBPrague! Alongside his new #ERCCoG, he has been selected for the EMBO Young Investigator Programme, recognizing his outstanding work and potential in the life sciences.
Congratulations, Tomáš, and @EMBO!
uochb.cz/en/news/664/to…
We are excited to announce our upcoming workshop designed to be interactive and beginner friendly. We will introduce Reverse Metabolomics, a novel approach to identifying microbial metabolites using mass spec. We will show YOU how to identify and categorize microbial metabolites!
Great to see such a boost in annotations this year!
Thanks to all who have been uploading to make this possible 🥳
Interested in contributing?
cmmc.gnps2.org
Check out the 2024 Emerging Investigators Issue for @J_ASMS. The future of mass spectrometry is definitely in good hands!!
pubs.acs.org/toc/jamsef/35/…
We visited Hanna Mazur-Marzec's lab in University of Gdansk to work with Robert Konkel and Hanna on IM-qTOF. More ion mobility news coming soon to our lab. #teammassspec
See you Tomorrow, 5 pm CET / 8 am PST. Sign up for free and join the mzmine webinar and discussions. Learn more about mzmine and its interactive statistics and molecular networking dashboards.
#CompMS#metabolomics#lipidomcs#massspectrometry
Ever wondered if there was a knowledgebase made for the characterization of microbial metabolites?
That’s us!
CMMC enables the shared use of data collected on these microbes by allowing streamlined deposition, sharing analysis tools, training, and more!
cmmc.gnps2.org
At BCCM/ULC we offer identification and characterization of your cyanobacterial strains on demand.
Check out our services here 👇👇👇👇👇👇
bccm.belspo.be/services-ULC
MassSpecGym: A benchmark for the discovery and identification of molecules
• MassSpecGym introduces a comprehensive benchmark and dataset for molecular discovery from mass spectrometry (MS/MS) data, addressing limitations of existing datasets in scope, standardization, and data leakage prevention.
• With 231,000 high-quality labeled MS/MS spectra representing 29,000 unique molecules, it is the largest open-access resource for MS/MS data, including three core challenges: de novo molecular structure generation, molecule retrieval, and spectrum simulation.
• The benchmark provides innovative splitting techniques to prevent data leakage and evaluates model performance in a generalization-demanding environment, setting a new standard for machine learning tasks in mass spectrometry.
• MassSpecGym offers three tasks to support different research goals: predicting molecular structures from MS/MS spectra, retrieving known molecules from spectral libraries, and simulating spectra for any given molecule.
• This tool is accessible through a user-friendly interface built on PyTorch Lightning and Hugging Face, promoting reproducibility and simplifying model evaluation and benchmarking within the broader machine learning community.
@tomas_pluskal@jjjvanderhooft@me_datapoint@sohahassoun@bittremieux@WishartLab@BoWang87@rschmid1789@corinnabrungs @boeckerlab @roman_bushuiev@AntonBushuiev
💻Code: github.com/pluskal-lab/Ma…
📜Paper: arxiv.org/abs/2410.23326#MassSpectrometry#MachineLearning#DrugDiscovery#Metabolomics#Benchmark
34 Followers 38 FollowingCYANOACTION is a Cost Action (CA23160) trying to tackle toxic cyanobacterial blooms in freshwater! Experts around Europe are putting forces together!
49 Followers 242 FollowingBioquímico y Disperso. Doctor en microbiología. Me gusta saber un poco de mucho.
No es lo mismo ser librepensador que pensar puras weas
1K Followers 925 FollowingAgriChar research group @helsinkiuni. Focusing on #biochar and lake #sediments #fertilizers #nutrient #recycling. Towards #carbon-negative #agriculture!🍀🌞🌱
973 Followers 2K FollowingInterested in metals and cyanobacteria, in any order. Based @IBVF_Sevilla, Universidad de Sevilla/CSIC. Views my own.
@cyanometals.bsky.social
551 Followers 633 FollowingAssoc. Prof. of Applied Phycology at Univ. of Florida/IFAS @UFIFAS_FLREC. Research focuses on algae & cyanos, from basic to applied. Tweets are my own.
802 Followers 3K FollowingAssistant Prof. @occidental by way of @moorelabsio and @davidhsumich. Enjoyer of dark beer, podcasts, and natural product biosynthesis. he/him/his
3K Followers 1K FollowingMetabolites (ISSN 2218-1989) is an #OpenAccess journal of #metabolism and #metabolomics. #IF 4.5, Q2,Indexed by #SCIE, #PubMed, PubMed Central, #Scopus.
47 Followers 160 FollowingMetabolomics South Africa aims to promote and facilitate relations and collaborations among scientists in the metabolomics field
61 Followers 98 FollowingPostdoctoral researcher at University of Tübingen - The Functional Metabolomics Lab - CMFI Cluster of Excellence
Marine Natural Products Chemist
790 Followers 1K FollowingAnalytical scientist, expert in mass spectrometry, investigating contaminants of emerging concern in the environment using non-target screening & big data tools
1K Followers 2K Following🤹🏻♂️ Postdoctoral Researcher @ThomaidisLab ,
passion: Analytical Chemistry🧪| excited about #Metabolomics 🧬| in love with HRMS🚀
🗣My Motto: science ⇄ fun
479 Followers 5K FollowingJ. Chem. Eng. Res. Prog. (ISSN: 3032-7059) is a journal focused on chemical engineering subject and related fields. Indexed by DOAJ. EIC: Prof. Dr. I. Istadi.
1K Followers 2K FollowingSenior Chromatography Wrangler. Doctor of Cruel and Unusual Mass Spectrometry. Trying to be Pythonic. Personal Account. https://t.co/A7hCx9zLzY
20 Followers 55 FollowingCyanobacterial Biosystematics, Phylogeny, Ecology
Researcher in Jadavpur University,
Assistant Professor In A. M. College, Jhalda
289 Followers 951 FollowingAssociate Professor at University of Cadiz. Technological processes to prevent or reduce marine pollution 🚢https://t.co/6bitLb9I6e
49 Followers 242 FollowingBioquímico y Disperso. Doctor en microbiología. Me gusta saber un poco de mucho.
No es lo mismo ser librepensador que pensar puras weas
2K Followers 939 FollowingFull professor in Analytical Sciences. Physical chemist, mass spectrometrist, biophysicist. Knowledge defragmentor. Hiking fan. 🇧🇪 in 🇨🇭.
1K Followers 925 FollowingAgriChar research group @helsinkiuni. Focusing on #biochar and lake #sediments #fertilizers #nutrient #recycling. Towards #carbon-negative #agriculture!🍀🌞🌱
973 Followers 2K FollowingInterested in metals and cyanobacteria, in any order. Based @IBVF_Sevilla, Universidad de Sevilla/CSIC. Views my own.
@cyanometals.bsky.social
155 Followers 232 FollowingCell and Tissue Toxicology research group at @RECETOX, Faculty of Science, Masaryk University, Brno, Czechia
https://t.co/mlfMXxh925
34 Followers 38 FollowingCYANOACTION is a Cost Action (CA23160) trying to tackle toxic cyanobacterial blooms in freshwater! Experts around Europe are putting forces together!
924 Followers 225 FollowingExplorative #naturalproducts genomics at #goetheuni Frankfurt and #LOEWE_TBG. Institute for Molecular Bio Science I Tweets by lab members
805 Followers 749 FollowingNational Museum of Natural History Goulandris/Greek Biotope-Wetland Centre (EKBY) | Εθνικό Μουσείο Φυσικής Ιστορίας Γουλανδρή/Ελληνικό Κέντρο Βιοτόπων-Υγροτόπων
3K Followers 775 Following#Cyanobacteria #AlgaeBloom #CitSci A multi-platform based global cyanobacterial harmful algal blooms monitoring|For more info plz contact:[email protected]
692 Followers 450 FollowingEnvironmental chemist focused on Human Exposure and Water Quality.
Associated Prof at @IDAEA_CSIC
Associated Editor at @EnvSciTech
6K Followers 1K FollowingDietrich Volmer · Research in analytical chem/mass spec/metabolomics · Editor-in-Chief of Anal. Sci. Adv. + Editor of Rapid Commun. Mass Spectrom · Views my own
3K Followers 737 FollowingResearch group @uncchemistry under Dr. Erin S. Baker focused on ion mobility-mass spectrometry research for biological and environmental systems.
3K Followers 1K FollowingA passionate “waterologist” | ChemEng | Prof @UCYofficial | Gaia Lab | Nature+Parrot fanatic 🦜| there are years that ask questions & years that answer
479 Followers 5K FollowingJ. Chem. Eng. Res. Prog. (ISSN: 3032-7059) is a journal focused on chemical engineering subject and related fields. Indexed by DOAJ. EIC: Prof. Dr. I. Istadi.
47 Followers 160 FollowingMetabolomics South Africa aims to promote and facilitate relations and collaborations among scientists in the metabolomics field
802 Followers 3K FollowingAssistant Prof. @occidental by way of @moorelabsio and @davidhsumich. Enjoyer of dark beer, podcasts, and natural product biosynthesis. he/him/his
3K Followers 410 FollowingExploring & engineering bacterial #naturalproducts at @ETH Zurich Institute of @Microbio_ETH | Therapeutic lipopeptides by @AnnaVagstad | Run by lab members
16K Followers 2K FollowingEnabling researchers to set up their own interdisciplinary research networks in Europe and beyond. Funded by the European Union. #COSTactions